The Clock You Should Be Paying Attention To (But Probably Aren’t)

I listened to an interesting podcast recently.  It reminded me of something I learned along the way, have not actively thought about in some time, but is important for all of us to keep in mind: Our bodies thrive on a schedule. This isn’t just about our daily planner; it’s about our circadian rhythm—the internal clock that governs almost every biological process we rely on.  

When our body can predict what we’re going to do and when we’re going to do it, it can "meet us there," priming our systems to perform at their peak. Utilizing this clock to our advantage is referred to as “chronotherapy”.

Here is why predictability is the ultimate health hack: 

Your Genes Have an "On" Switch

At the most fundamental level, our genes are not firing all at once. Instead, they act like light switches, flipping on and off in response to external and internal cues.

This "on-off switching" isn't limited to our human cells; our gut microbiome has its own set of rhythmic triggers too. When you teach your body a consistent routine, these systems become more efficient. They stop reacting to chaos and start working off a consistent predictive model.  

Without this predictability, our cells and microbes are stuck in a state of "constant reaction." This leads to:

• Increased systemic inflammation.

• Hormonal imbalances.

• Reduced metabolic efficiency.
  

The Melatonin and Cortisol Dance

One example of this clock and all the switches that go off and on is the relationship between melatonin and cortisol.

At night, as darkness falls, melatonin levels rise to usher in sleep, while cortisol (the alertness hormone) drops.  In the morning, when sunlight hits our eyes, the opposite occurs. Melatonin plummets, and cortisol spikes.

The "sunlight" part is important.  Ordinary indoor light bulbs don't cut it. Sunlight contains specific wavelengths that initiate this hormonal shift. To mimic this effectively indoors, you need a specialized lamp high on the LUX scale (usually 10,000 LUX).

Why a "Cortisol Spike" is Actually Good

Right now, you might be thinking – wait a second… I thought cortisol going up was bad! Cortisol gets a bad reputation as the "stress hormone," but when delivered at the right time and in the right dose, it’s a superpower. A morning cortisol spike floods the bloodstream with just enough glucose to provide the extra fuel our brain needs to feel focused and energized.

This spike also kickstarts our gut. It stimulates serotonin production in the microbiome, which:

• Improves gut motility, explaining why most people have a bowel movement within an hour of waking.

• Boosts mood.  After all, serotonin is our primary "happiness" hormone.

• Prepares for sleep.  Turns out, serotonin is the direct chemical precursor to melatonin. By getting our morning right, we are literally "building" our sleep for later that night.
  

Our Microbiome: The Night Shift vs. The Day Shift

The bacteria in our gut are just as schedule-oriented as we are.

During waking hours our microbiome favors activity of bacteria that are really good at generating free fatty acids -- which manage satiety (fullness), regulate insulin, and calm inflammation.  Our natural GLP-1 production can start hitting on all cylinders!

During sleep, the system shifts toward repair and recovery, reinforcing the gut lining to keep it healthy, and preparing for the next day. 

When we disrupt this rhythm—through irregular sleep, shift work, or chronic stress—this microbial balance shatters. We lose the ability to signal fullness or repair the gut, leading to a "leaky" or inflamed environment.

How to Sync Your Clock: Chronotherapy You Can Deploy Today

If you want to move from "circadian chaos" to biological harmony, start with these three pillars:

1. Prioritize Routine: Aim for a stable sleep-wake cycle. Consistency allows your body to automate hormone production rather than guessing when to fire.

2. Seek Early Light: Get 10-20 minutes of sunlight first thing in the morning. If you live in a northern climate or work in a windowless office, invest in a high-LUX light therapy lamp. Adding some exercise as part of your morning routine can increase cortisol efficiency further.  An outdoor walk shortly after waking is probably the "gold standard" for setting your cortisol levels at optimal levels. (BTW, the sun’s rays get through even on a cloudy day – so as long as it’s light out, you’re getting all the benefits from that important sun exposure).

3. Manage the Stress Override: Chronic stress keeps cortisol levels high all day. This "flattens" your rhythm, disrupting gut repair and fragmenting your sleep. Attending to stress is probably one of the biggest levers you can pull to get your clock reset. 

The last piece of advice definitely falls into the “easier said than done” category.  But it doesn’t make it any less critical.  Physical activity, meditation, breathing exercises, prayer – these can all lessen the impact of stress on our bodies.  Sometimes, just recognizing that we are under stress can be the big unlock that jump starts the healing process.

The Bottom Line: Your body is a high-performance machine that runs on a schedule. Stop keeping it guessing, and it will start keeping you healthy.